Harmy said:
Did you try demuxing first?
Yes. When I demux the h264 stream before remuxing, the movie does start when it’s double-clicked but it still takes a while to catch up when you click in the seek bar. I notice when muxing im mkvmergeGUI that it takes a long time for the progress bar to show anything, like it’s reading through the entire file, then it shoots up to a hundred percent and takes another minute as it seems to write the file. I do lots of video converting/muxing and this is definitely unusual behaviour. I analyzed it in avinaptic and it showed a lot of buffer overflows:
Selected profile DivX 720HD
Resolution Ok
Framerate 23.976024 <> 30
Buffer underflow 00:12:38 (frame 18173)
Buffer underflow 00:12:39 (frame 18204)
Buffer underflow 00:12:41 (frame 18234)
Buffer underflow 00:12:49 (frame 18449)
Buffer underflow 00:13:02 (frame 18759)
Buffer underflow 00:13:04 (frame 18808)
Buffer underflow 00:13:06 (frame 18843)
Buffer underflow 00:13:45 (frame 19769)
Buffer underflow 00:29:09 (frame 41925)
Buffer underflow 00:29:11 (frame 41973)
Buffer underflow 00:29:12 (frame 42014)
Buffer underflow 00:29:28 (frame 42390)
Buffer underflow 00:31:14 (frame 44930)
Buffer underflow 00:32:03 (frame 46097)
Buffer underflow 00:32:07 (frame 46198)
Buffer underflow 00:32:09 (frame 46259)
Buffer underflow 00:32:11 (frame 46287)
Buffer underflow 00:32:28 (frame 46709)
Buffer underflow 00:32:39 (frame 46970)
Buffer underflow 00:32:42 (frame 47048)
Error Too many violations