As I've said before on these boards, I'd love it if the main episodes from now on (7,8,9 and any possible future numbers) could open with the Fox logo/fanfare even though it's Disney distributing. I was naively hoping that Fox's ownership of distribution rights on the existing films (and Disney's desire for them) could lead to a deal where that might actually happen. But if Disney is willing to just chop the Fox logo off the other five films, yeesh, not a good sign.
The Paramount logo showed up in Avengers and Iron Man Three, but that was different. Marvel had signed a distribution deal with Paramount years earlier, before Disney bought Marvel. When Disney wanted to buy Paramount out of the last two movies in their distribution deal, Paramount stipulated that their logo remain in those movies. Fox has no such pre-existing legal leverage over Disney.
The spin-offs (Rogue One, Josh Trank's untitled and any future ones) can do their own thing logo-wise for all I care.