That seems pretty convoluted, and personally there was never a question about what color Anakin's saber would be. It's the saber that went to Luke, therefore it is blue. Introducing a red saber through fan editing adds a host of questions that need rationalizations, as you demonstrated.

Two other minor saber FX I wouldn't mind would be to give Plo Koon a yellow saber and Ki Adi Mundi a purple one, matching their pre-2002 depictions and implying the possibility of other saber colors out there while keeping the vast majority the standard blue or green. Their two sabers are only onscreen in AOTC for about twenty seconds, plus Ki Adi Mundi's death scene in ROTS.

Thank you for the dialogue suggestions, sir. I quite like the third one; it sounds medically professional. I'll try recording it several times. As long as I can convince myself that one of the takes is okay, I'll put it in. Its rough to use my own voice. A commentary is one thing, but it's gotta be up to snuff if it's gonna be in the actual movie.