Vector Prime
Onslaught
Ruin
Hero's Trial
Jedi Eclipse
Balance Point (boring and mostly unimportant)
Conquest
Rebirth (Both are excellent)
Star by Star(saddest of them all)
Dark Journey(didn't read it)
Rebel Dream
Rebel Stand(Very good duology)
Traitror(Best stand alone)
Destiny's Way
Remnant
Refugee(best of the trilogy)
Reunion
Final Prophecy
The Unifying Force(I wasn't to fond of the conclusion, but that battle was nothing short of epic)