Well, since it looks like a v2 may actually happen, would anyone be interested in repositioned subtitle files? I've positioned everything (AFAICT) so that it's more clearly CIH-safe and type-safe (even further into the image than they already are, sorry Andrea :-/ ), and fixed the two mangled Japanese subs.
I can't guarantee I didn't miss something, since I mostly just bulk-converted and spot-checked them. But since Andrea prefers subs outside the picture, he may not want to incorporate them at all.