darth_ender said:

Ah, very cool. This really gets me thinking...if Maul remains the primary villain in a trilogy as I've suggested, it means that Dooku can be scaled back a great deal, but still left in. I know many have toyed with the rogue Jedi, thought, and perhaps that could still be implemented. He could remain an unwitting puppet to Darth Sidious, but not a willing apprentice. In Ep III, all references to Palpatine aboard Grievous's ship would be removed, and Grievous would merely be Dooku's General. Dooku really would be a Force user who simply wanted to expand his powers, but not an all-out Sith. He ultimately takes his Separatists and parts from the Republic, and while his methods may be grim, he is not purely evil, but rather a misguided Force user. I dunno, just tossing ideas out there. Nothing could possibly happen till the series is over anyway.

EDIT: Here's the pictue I was referring to. Not sure if it's a real screenshot or someone's attempt to replicate it, but here it is anyway.

I've always intended to have Dooku be a rogue Jedi. Just makes more sense that way.

As for a Clone Wars edit...I feel like you'd have to fan edit the whole series, or at least most of it. There are too many great storylines (besides the MAUL one, which is pretty damn good.) to NOT include.