SilverWook said:
It's probably long out of print, but a collected edition of DC Trek comics I was given to read once while recovering from an illness had a kick ass story. It bridged the end of the five year mission and the first film. Pike and Talos IV were also involved. If you can find it, it's a great read!
For the all too brief time Marvel had the license, they put out a good Pike era comic.
Was this It?
Edit:
or this one?