Pretty much all reviews of the Blu-ray box I've read are stating that the original versions are not included, and that some of these more recent changes are indeed for the worse.
There may be TF.Net users that are in love with the "NOOOOO", but most professional reviewers seem to hate it. Despite high sales numbers, the bad press could be harmful in the long run. Especially when it comes to the 3D re-releases...