It is a shame that this project is inactive. I think I'll pm fanfiltration if I can start it up again. Anyhow my first batch of basic ideas, (some developed from suggestions):

Replace Epislon 9 exteriors replaced with shorter ones of the Argus arrary.
The Klingon/Vger encounter is kept as it is but sped up 2x or 2.5x.
The redubbed Klingon speech in the aformentioned encounter reference the desctruction of a Klingon starbaseby the, "Federation weapon" maybe with Klingon subtitles instead of English just to be different. :)
Change the name to, "Star Trek In Thyne Image" so it fits in better with those of the other TOS films.