It's true that the script doesn't completely manage to eliminate the image shake from the GOUT video. It does, however, reduce it considerably, so that it's only visible in certain areas when looking rather closely. The film experience as a whole is vastly improved by this, and while I'm sure it still presents a problem in merging with higher quality footage, it has to be better than using the plain GOUT by itself.

Dunno if I'm sold on the transition or not, because it looks weird seeing the beginning of an optical wipe and a dissolve happening at the same time--still, it's better than it was before.

I almost wish the remaining shadow of the probe thing hadn't been pointed out, because now I can't unsee it. So it looks like you're going to have to get rid of that too . . . ;)