AOTC is a prime candidate for radical reworking.
Padme's main objection to the formation of the Grand Army is trying to minimise the prospect of galactic war.
If the Clone Army was already an option on the table rather than a mystery (which nobody bothers to solve) new footage or dialogue could be added to make the issue more to do with the Republic losing it's moral integrity.
The Republic has outlawed slavery within it's borders but the Clones are essentially slaves created to serve the Republic.
They are programed like machines using, for want of a better term brain washing.
The Jedi use mind control on the weak minded and that could be sited as a defence of using the technology bringing that up could help Anakin start to look at the Jedi's double standards in a bad light as a former slave himself and a Jedi sympathetic to what the Chancellor is trying to do.