That color correction is a bit of a mixed bag. The good ones look like you've cleaned sludge off the camera lens. The bad ones look like you washed the color out of the scene.

Be mindful that the chase is taking place in a jungle. Light being filtered through the leaves shouldn't look like it's being cast by fluorescent lightbulbs.

@HeKS: I really don't know why you're messing with that scene. I never felt there was anything wrong with it.

Using Photoshop is a waste of time since it gets you no closer to actually editing the scene. If you look, you can see changes in black levels/color between the wipe. I don't know if that's in the original or your doing, but it needs to be fixed.

Finally: It is not a stretch for Indy to assume that someone who just robbed Area 51 (and made a right mess doing it), might have high-tailed it out of the neighborhood.

My guess is she's long gone too. Don't get bogged down on the little things.