I did IFO rips... don't recall my "force film" setting. Upon review I was incorrect in my steps.... I didn't have Womble so I was just using DGIndex against the raw M2Vs.
Is not doing the Womble step the cause? If so is there any freeware that achieves what it is doing in this step (minus the 30 day trial)? Also, since I bypassed this step, I also didn't reencode the M2Vs in TmpEnc.
To the best of my knowledge the only side-effect I've come across not reencoding the M2Vs is this frame number matchup with the scripts you guys create. Everything else seems fine on video enhancements and audio sync.