I do agree that the trilogies should have been more seperate. No droids in the prequels, things wrapped up between 3 and 4 a little neater, etc. There was too many loose ends between the trilogies. I don't think they are connected all that well. Lucas seemed to do it in a way that felt more out of obligation that for the sake of story flow.
Then again, I may not know what I'm talking about here. The whole thing just feels wrong now, that's all.