Currently just before Neo brains Smith/Bane in TRW, Smith/Bane says "It isn't over Mr. Anderson". If I cut that line, it's a bit jerky and looks a bit darker for Neo (the line seems to encourage him to finish it).
The problem is that it IS over, all Smiths are now defeated in my cut.
You can either surmise it's an empty threat or a bad edit. I was hoping to pop in the line "Yes it is" or "It's over" from Keanu when he swings. Constantine doen't have anything helpful (that I noticed).
[Edit]
Clip removed.