Ok, but it's how I've said, just little details... that's all. When you see that on a "continuity" point of view, you easily understand that the EU is, for GL, a very secondary universe...
There are no real big references... The biggest one I've seen is Obi's line concerning Quinlan Vos. And that jedi was intended to be seen in ROTS, but has been cut...

I guess you're forgetting that Aayla Secura was an EU character LONG before she appeared in AOTC. In fact, GL saw a comic book cover with her on it and then decided to make her a "real" character