I can understand why it was omitted for scene transitioning reasons (with the arrangement you had there didn’t really seem like any good place to put it), but I always felt it was a shame that Anakin’s counseling with Yoda wasn’t in LOE. I think it’s a very well-written scene and it further shows why Anakin went to the Sith: the Jedi didn’t tell him what he wanted to hear.

It’s your edit of course, you can do what you want, but since you brought it up I guess I thought my thoughts might be appropriate.