Then process each piece individually by VirtualDub's job capability and join the now ITVC'd cleaned sections together to create a final complete film. Slow yet, laborious yes but it's the only 100% reliable way I know of removing 3:2 pulldown, AviSynth Decomb filter and VirtualDub's automatic removal can't do the job 100% reliably, AviSynth Decomb comes close but not close enough so I use it to get a good-enough 23.976fps source to test cleaning filters on.
I've done this process on a few NTSC laserdisc captures to create progressive NTSC DVDs and PAL DVDs, usually end up breaking the captured avi into between 5 and 15 pieces, one day I might put fingers to keyboard and create a guide on how I do the process.