Yes, remember when Anakin asks if Obi Wan had been there? The scene in which he actually went there was cut. Also, in the scene following that with Anakin, he originally sat in the same place Obi - Wan had and says "I sense something....fimiliar" which I thought was cool. During Jar Jar's scene, Palpatine questions Obi Wan's abilities on the mission in which he had wanted Anakin to go one and says that he has heard idle Senate gossip that Obi Wan has been involved in an affair with a young female senator. Her identity is unknown, but that the rumor is being spread. Later on, in the scene in which the Senators present the petition to the Chancellor, Palpatine says that Padme is hiding something, and that he doesn't think she can be trusted. Anakin continues to defend her, but the seed of doubt is continuely placed. Thus, when Anakin acts paranoid it rings true, and that is why he is tired of hiring about Obi Wan and feels betrayed.

Also, about a quarter of the ObiWan/Anakin fight was cut, Anakin using force powers similiar to ESB and some solid dialogue.