Guide looks pretty good! I've never actually used ClownBD, I've always used eac3to and TSmuxer separately. I might've been doing it the hard way, but oh well.

One minor thing:

Jonno said:

Dolby Digital Plus aka E-AC3 is not BD-friendly,

This actually depends on the player. I believe most don't support it, but some will. My Panasonic DMP-BDT310 plays discs muxed with DD+ just fine. My Oppo BDP-80 will play it so long as the player is set to LPCM and not bitstream. I think I remember someone on AVS saying the same was true for his Pioneer player.

But yeah, the PS3 freezes up when you try to play a disc with DD+.